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Intro | ||||
| About PseudoBase | Retrieve by class or by by property | Submit Pseudoknots | |||
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TMGMV_PKbulge |  |
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| PKB-number: | PKB141 |
| Definition: | tRNA-like structure bulge pseudoknot of tobacco mild green mosaic virus |
| Organism: | tobacco mild green mosaic virus |
| Abbreviation: | TMGMV_PKbulge |
| RNA type: | Viral tRNA-like |
| Keywords: | tobamovirus; RNA 3'end |
| EMBL number: | M34077 |
| Submitted by: | A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl) |
| Supported by: | Sequence comparison; Structure probing |
| References: |
[1] Garcia-Arenal F. (1988). Virology 167:201-206.
[2] Mans R.M.W. et al. (1991). Eur. J. Biochem. 201:303-324. |
| Stem sizes: Loop sizes: |
9 3 4 31 9 |
| Position Paired: | 6250-6258; 6297-6305 6267-6271; 6292-6296 6275-6278; 6284-6287 6263-6265; 6315-6317 |
| Bracket view of structure: |
6250 6260 6270 6280 6290 6300 6310
# 9|123456789|123456789|123456789|123456789|123456789|123456789|12345678
$ 6249 UUGUCAUAUCUGGAUCCAACAGUUAAACCAUGUGAUGGUGUAUACUGUGGUAUGGCGUAAAACAUCGGAG=6318
% 6249 :(((((((((::::[[[:(((((:::((((:::::))))::::)))))))))))))):::::::::]]]: