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PSIV_IRES

PKB-number: PKB190
Definition: Pseudoknot of the internal ribosome entry site (IRES) region
Organism: Plautia stali intestine virus
Abbreviation: PSIV_IRES
RNA type: Viral others
Keywords: Picornaviridae; Internal ribosome entry site (IRES); Translation;
EMBL number: AB006531
Submitted by: A.P.Gultyaev ( A.P.Gultyaev@Biology.LeidenUniv.nl)
Supported by: Mutagenesis
References: [1] Sasaki J. & Nakashima N. (2000). Proc. Natl. Acad. Sci. USA 97:1512-1515.
Stem sizes:
Loop sizes:
9 5
1 0 9
Position Paired:
6150-6153; 6175-6178
6157-6161; 6168-6172
6163-6167; 6188-6192
Bracket view of structure:
           6150      6160      6170      6180      6190
      #      9|123456789|123456789|123456789|123456789|12345
      $ 6149 CUCGCUCAAACAUUAAGUGGUGUUGUGCGAAAAGAAUCUCACUUCAA=6195
      % 6149 :((((:::(((((:[[[[[)))))::)))):::::::::]]]]]:::

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© final design and maintenance: F.H.D.(Eke) van Batenburg; 2000-12-21 PKB00190.html